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Emld

EMLD

Record added by Jurg Ott (the original Rockefeller list)

Full Name

EM estimation of haplotype frequencies and LD calculation

Version

September 2003

Description

A quick and handy program to calculate pair-wise linkage disequilibrium based on SNP genotype data from unrelated individuals. EM algorithm is used to estimate pair-wise haplotype frequencies. The output file is in the format of input file for GOLD program, thus it can be directly plug into GOLD to get LD plots.

Author

Dakai Zhu (email: dkz@mdanderson.org)

URL

http://epi.mdanderson.org/~qhuang/Software/pub.htm

Language

Java

OS

UNIX, MS-Windows

EXE

emld