Genecounting

Record added by Jurg Ott (the original Rockefeller list)

2.2

gene-counting for haplotype analysis with permutation tests for global association and specific haplotypes, accounting for missing data

Jinghua Zhao (MRC Epidemiology Unit at Strangeways Research Lab, UK) (email: jinghua.zhao@mrc-epid.cam.ac.uk)

http://www.mrc-epid.cam.ac.uk/Personal/jinghua.zhao/software/

C

MS-Windows, UNIX(Solaris), Linux

gc, gcp, gcx, pgc., RUNGC, SCANASSOC, COMPGR, SCANGROUP, LDPAIRS

• Zhao, Lissarrague, Essioux, Sham (2002), “GENECOUNTING: haplotype analysis with missing genotypes”, Bioinformatics, 18(12):1694-1695.
• Zhao (2004), “2LD, GENECOUNTING and HAP: Computer programs for linkage disequilibrium analysis”, Bioinformatics, 20:1325-1326.
• Curtis, Knight, Sham (2006), “Program report: GENECOUNTING support programsProgram report: GENECOUNTING support programs”, Annals of Human Genetics, 70:277-279.