Haplotter

Record added by Jurg Ott (the original Rockefeller list)

HAPLOTTER is a web application that has been developed to display the results of a scan for positive selection in the human genome using the HapMap data. It can be used as a resource to examine various population genetic measures in a genomic region. Measures that are currently displayed include iHS (a statistic developed to detect recent positive selection), Fay and Wu’s H, Tajima’s D and Fst.

• S. Kudaravalli
• X.Wen
• J.K.Pritchard (email: pritch@uchicago.edu) (Univ of Chicago)

http://hg-wen.uchicago.edu/selection/haplotter.htm

web-based

Voight, Kudaravalli, Wen, Pritchard (2006), “A map of recent positive selection in the human genome”, PLoS Biology, 4(3):e72.