Illuminus
Record added by Jurg Ott (the original Rockefeller list)
Illuminus is a fast and accurate algorithm for assigning single nucleotide polymorphism (SNP) genotypes to microarray data from the Illumina BeadArray technology.
Yik Teo et al. (Wellcome Trust Sanger Institute)
http://www.sanger.ac.uk/resources/software/illuminus/
C++
Teo, Inouye, Small, Gwilliam, Deloukas, Kwiatkowski, Clark (2007), “A genotype calling algorithm for the Illumina BeadArray platform”, Bioinformatics, 23(20):2741-2746.