Lamarc

Record added by Jurg Ott (the original Rockefeller list)

Likelihood Analysis with Metropolis Algorithm using Random Coalescence

2.0.2 (August 2005)

The LAMARC program estimates effective population sizes, exponential population growth rates, and past migration rates between two or n populations, and simultaneously estimates the per-nucleotide recombination rate. Currently Lamarc can use DNA or RNA sequence data, SNP data, and microsatellite data.

• Mary Kuhner
• Jon Yamato
• Peter Beerli (email: lamarc@gs.washington.edu)

http://evolution.genetics.washington.edu/lamarc/lamarc_prog.html

C++

Linux, MS-Windows, MacOS

lamarc, migrate, coalesce, fluctuate, recombine