PAT H

PATH

Record added by Jurg Ott (the original Rockefeller list)

Version

1.0.7 (September 28, 2009)

Description

The Path web application is a first-step bioinformatics approach to investigate gene-gene interactions in genetic association studies. Path is designed to do: 1. Interface your SNP data with biological information from several online bioinformatics databases. 2. Generate biologically plausible hypotheses for testing gene-gene interactions. 3. Select a subset of SNPs and conduct SNP-SNP interaction tests. 4. Store analysis results. 5. Explore analysis results through interactive plots and summary tables.

Author

email: genapha@mrl.ubc.ca

URL

http://genapha.icapture.ubc.ca/PathTutorial/

OS

MS-Windows, Linux

Reference

Zamer, Tripp, Ellis, Daley (2009), “Path: a tool to facilitate pathway-based genetic association analysis”, Bioinformatics, 25(18):2444-2446.